Publications

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2018
Lamurias, A., L. A. Clarke, and F. M. Couto, "BO-LSTM: Classifying relations via long short-term memory networks along biomedical ontologies", bioRxiv: Cold Spring Harbor Laboratory, pp. 336719, 2018.
2017
Lamurias, A., L. A. Clarke, and F. M. Couto, "Extracting microRNA-gene relations from biomedical literature using distant supervision", PloS one, vol. 12, no. 3: Public Library of Science, pp. e0171929, 2017.
Lamurias, A., J. D. Ferreira, L. A. Clarke, and F. M. Couto, "Generating a Tolerogenic Cell Therapy Knowledge Graph from Literature", Frontiers in Immunology, vol. 8: Frontiers, pp. 1656, 2017.
2016
Lamurias, A., M. J. Rodrigues, L. A. Clarke, and F. M. Couto, "Extraction of Regulatory Events using Kernel-based Classifiers and Distant Supervision", ACL 2016, pp. 88, 2016.
Bastos, H. P., L. Sousa, L. A. Clarke, and F. M. Couto, "Functional coherence metrics in protein families", Journal of biomedical semantics, vol. 7, no. 1: BioMed Central, pp. 41, 2016.
2013
Bastos, H., L. A. Clarke, and F. Couto, "Annotation extension through protein family annotation coherence metrics", Frontiers in genetics, vol. 4: Frontiers Media SA, 2013.